Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 AF228730.6-201ENST00000641497 218 ntBASIC19.55■□□□□ 0.72
SMARCA5O60264 AC084121.3-201ENST00000641716 218 ntBASIC19.55■□□□□ 0.72
SMARCA5O60264 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SMARCA5O60264 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCA5O60264 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.55■□□□□ 0.72
SMARCA5O60264 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCA5O60264 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCA5O60264 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.55■□□□□ 0.72
SMARCA5O60264 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMARCA5O60264 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 BANP-201ENST00000286122 2368 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCA5O60264 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCA5O60264 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.54■□□□□ 0.72
SMARCA5O60264 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCA5O60264 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC19.54■□□□□ 0.72
SMARCA5O60264 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
SMARCA5O60264 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.54■□□□□ 0.72
SMARCA5O60264 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMARCA5O60264 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
SMARCA5O60264 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMARCA5O60264 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMARCA5O60264 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCA5O60264 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMARCA5O60264 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 TSSK5P-201ENST00000423978 907 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 AC067863.1-201ENST00000494933 530 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCA5O60264 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCA5O60264 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.53■□□□□ 0.72
SMARCA5O60264 IGHV3-42-201ENST00000520410 361 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.53■□□□□ 0.72
SMARCA5O60264 AC025048.3-201ENST00000590609 569 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 LINC01115-203ENST00000606068 577 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 AC005702.4-201ENST00000618393 416 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 AL390754.1-201ENST00000619088 582 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 AL109936.8-201ENST00000641772 604 ntBASIC19.53■□□□□ 0.72
SMARCA5O60264 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
SMARCA5O60264 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMARCA5O60264 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC19.53■□□□□ 0.72
SMARCA5O60264 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.52■□□□□ 0.72
SMARCA5O60264 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC126177.1-201ENST00000547829 2218 ntBASIC19.52■□□□□ 0.72
SMARCA5O60264 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMARCA5O60264 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMARCA5O60264 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.52■□□□□ 0.72
SMARCA5O60264 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
SMARCA5O60264 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCA5O60264 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.52■□□□□ 0.72
SMARCA5O60264 RFPL4AP1-201ENST00000530883 850 ntBASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms