Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
DUX1O43812 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.13■□□□□ 0.01
DUX1O43812 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.13■□□□□ 0.01
DUX1O43812 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 AC022210.1-201ENST00000449856 793 ntBASIC15.13■□□□□ 0.01
DUX1O43812 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 VDAC1P7-201ENST00000462417 847 ntBASIC15.13■□□□□ 0.01
DUX1O43812 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC15.13■□□□□ 0.01
DUX1O43812 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.13■□□□□ 0.01
DUX1O43812 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.13■□□□□ 0.01
DUX1O43812 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 AC124283.3-201ENST00000570869 594 ntBASIC15.13■□□□□ 0.01
DUX1O43812 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 MIR5189-201ENST00000577370 114 ntBASIC15.13■□□□□ 0.01
DUX1O43812 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC15.13■□□□□ 0.01
DUX1O43812 BTNL10-201ENST00000595971 695 ntBASIC15.13■□□□□ 0.01
DUX1O43812 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.13■□□□□ 0.01
DUX1O43812 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 AC092364.2-201ENST00000596710 2692 ntBASIC15.13■□□□□ 0.01
DUX1O43812 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.13■□□□□ 0.01
DUX1O43812 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
DUX1O43812 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
DUX1O43812 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.13■□□□□ 0.01
DUX1O43812 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 AC018665.1-201ENST00000622927 1362 ntBASIC15.12■□□□□ 0.01
DUX1O43812 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 ACTG1P3-201ENST00000431775 1114 ntBASIC15.12■□□□□ 0.01
DUX1O43812 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 USP32P1-208ENST00000506594 1164 ntBASIC15.12■□□□□ 0.01
DUX1O43812 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.12■□□□□ 0.01
DUX1O43812 PTP4A1P2-201ENST00000546033 454 ntBASIC15.12■□□□□ 0.01
DUX1O43812 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.12■□□□□ 0.01
DUX1O43812 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.12■□□□□ 0.01
DUX1O43812 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.12■□□□□ 0.01
DUX1O43812 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.12■□□□□ 0.01
DUX1O43812 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC15.12■□□□□ 0.01
DUX1O43812 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
DUX1O43812 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms