Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 HMGA1P7-201ENST00000406908 502 ntBASIC11.18□□□□□ -0.62
LINC01546A6NGU7 TOB2P1-201ENST00000469761 992 ntBASIC11.18□□□□□ -0.62
LINC01546A6NGU7 AC063952.2-201ENST00000498792 1227 ntBASIC11.18□□□□□ -0.62
LINC01546A6NGU7 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 AP006294.2-201ENST00000641667 209 ntBASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 AC027612.1-201ENST00000445234 2395 ntBASIC11.18□□□□□ -0.62
LINC01546A6NGU7 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC01546A6NGU7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 AC089987.1-201ENST00000551654 2209 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SLC6A6P1-201ENST00000413933 1850 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 ELK2BP-201ENST00000415014 1224 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 RBM17P3-201ENST00000417687 1192 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 AC087499.1-201ENST00000418141 1075 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 TPT1P11-201ENST00000458482 498 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 TMEM198B-204ENST00000484016 896 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 AC005363.2-201ENST00000618631 242 ntBASIC11.17□□□□□ -0.62
LINC01546A6NGU7 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 FES-203ENST00000394302 2133 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC01546A6NGU7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 AC073439.1-201ENST00000624121 1774 ntBASIC11.16□□□□□ -0.62
LINC01546A6NGU7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC01546A6NGU7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms