Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 INGX-202ENST00000489074 768 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 MEIS3P1-201ENST00000495167 958 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 AC104794.3-201ENST00000566840 1248 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.52■□□□□ 0.08
TRBV5-4A0A0C4DH59 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC126177.1-201ENST00000547829 2218 ntBASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 MFF-204ENST00000353339 2186 ntTSL 5 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TRBV5-4A0A0C4DH59 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 RPL5P21-201ENST00000404620 815 ntBASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 SPCS2P1-201ENST00000561636 679 ntBASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 AL355385.1-201ENST00000606123 409 ntBASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 AL158212.4-201ENST00000624062 1286 ntBASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC013268.4-201ENST00000637413 2228 ntBASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRBV5-4A0A0C4DH59 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 AC104640.1-201ENST00000562617 2109 ntBASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.5■□□□□ 0.07
TRBV5-4A0A0C4DH59 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms