Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.3■□□□□ 0.52
R3HCC1Q9Y3T6 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC041040.2-201ENST00000622926 2899 ntBASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC005912.2-201ENST00000619492 2400 ntBASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
R3HCC1Q9Y3T6 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AL513480.1-201ENST00000451731 511 ntBASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC096734.2-201ENST00000562054 433 ntBASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC005412.3-201ENST00000580309 715 ntBASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
R3HCC1Q9Y3T6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 KRT8P49-201ENST00000604166 1432 ntBASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.27■□□□□ 0.52
R3HCC1Q9Y3T6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms