Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HDGFL3Q9Y3E1 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HDGFL3Q9Y3E1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AL590560.3-201ENST00000623350 461 ntBASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.27□□□□□ -0.13
HDGFL3Q9Y3E1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SDHAP3-202ENST00000515467 728 ntBASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AL512361.1-201ENST00000554200 418 ntBASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AC010336.2-201ENST00000564226 506 ntBASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
HDGFL3Q9Y3E1 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms