Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 AC106881.1-201ENST00000605849 3329 ntBASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TRAPPC4Q9Y296 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 AC007191.1-201ENST00000623179 2995 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 AC093520.2-201ENST00000561830 333 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 SNHG9-202ENST00000564014 471 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 AC061975.2-201ENST00000581722 295 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 LINC00528-201ENST00000600723 2160 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 AC069224.1-201ENST00000566372 1715 ntBASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
TRAPPC4Q9Y296 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 KRT18P32-201ENST00000424695 1287 ntBASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 AC136621.1-201ENST00000624017 2304 ntBASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
TRAPPC4Q9Y296 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms