Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC14.09□□□□□ -0.15
CLCF1Q9UBD9 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.08□□□□□ -0.15
CLCF1Q9UBD9 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.15
CLCF1Q9UBD9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.08□□□□□ -0.15
CLCF1Q9UBD9 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLCF1Q9UBD9 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AC011495.1-201ENST00000498085 584 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AC104596.2-201ENST00000512793 793 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 MIR8072-201ENST00000614241 80 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 IGHV3-72-202ENST00000621503 303 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 AL607033.1-201ENST00000623900 1599 ntBASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLCF1Q9UBD9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC069224.1-201ENST00000566372 1715 ntBASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 CLK3P2-201ENST00000427566 1453 ntBASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AL512384.1-201ENST00000406683 331 ntBASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.07□□□□□ -0.16
CLCF1Q9UBD9 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms