Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 MIR648-201ENST00000385046 94 ntBASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC134915.1-201ENST00000426461 574 ntBASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 RPS2P32-201ENST00000439199 892 ntBASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 RPL13AP25-201ENST00000484130 612 ntBASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LRIT1Q9P2V4 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AL607033.1-201ENST00000623900 1599 ntBASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AC006449.5-201ENST00000610658 2098 ntBASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 KRT43P-201ENST00000434019 910 ntBASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
LRIT1Q9P2V4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.27■□□□□ 0.04
LRIT1Q9P2V4 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms