Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ATP6V0A4Q9HBG4 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ATP6V0A4Q9HBG4 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.66■□□□□ 0.42
ATP6V0A4Q9HBG4 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 Z97205.2-201ENST00000564697 1639 ntBASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 LINC02447-202ENST00000501888 2146 ntBASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 OR8S1-201ENST00000310194 1080 ntBASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AC087499.6-201ENST00000411576 835 ntBASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SPDYE18-201ENST00000510091 1050 ntBASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ATP6V0A4Q9HBG4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
ATP6V0A4Q9HBG4 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ATP6V0A4Q9HBG4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
ATP6V0A4Q9HBG4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SPDYE19P-201ENST00000338590 713 ntBASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC098614.1-201ENST00000368528 745 ntBASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 DOC2GP-202ENST00000514950 1163 ntBASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 AL391825.1-201ENST00000457671 1364 ntBASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ATP6V0A4Q9HBG4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 AC138969.3-201ENST00000546612 1459 ntBASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 AC138932.2-201ENST00000548268 1459 ntBASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 AC126755.4-201ENST00000549796 1459 ntBASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ATP6V0A4Q9HBG4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms