Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 LRRFIP1P1-201ENST00000498774 2246 ntBASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RTFDC1Q9BY42 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 ACTBP8-201ENST00000403258 1108 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 AL590640.2-201ENST00000457038 527 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 APOA2-204ENST00000464492 530 ntTSL 3 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 SCARNA20.5-201ENST00000516991 142 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 ACTG1P17-201ENST00000558391 1119 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 BX539320.1-201ENST00000623759 877 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RTFDC1Q9BY42 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 NEU3-202ENST00000526068 431 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 AC104982.3-201ENST00000581995 514 ntBASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 CYGB-203ENST00000589145 788 ntTSL 3 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.02■□□□□ 0.64
RTFDC1Q9BY42 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC19.02■□□□□ 0.63
RTFDC1Q9BY42 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC19.02■□□□□ 0.63
RTFDC1Q9BY42 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RTFDC1Q9BY42 AC011477.6-201ENST00000604980 1927 ntBASIC19.02■□□□□ 0.63
RTFDC1Q9BY42 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 FOS-202ENST00000535987 1402 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 RN7SL190P-201ENST00000582519 257 ntBASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 AL096828.3-201ENST00000615354 462 ntBASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC19.01■□□□□ 0.63
RTFDC1Q9BY42 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms