Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AC098831.1-202ENST00000438821 336 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 FAAHP1-202ENST00000446499 1238 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AC109635.5-201ENST00000533593 962 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AL049840.3-201ENST00000602669 611 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 AL691432.3-201ENST00000621860 400 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 AC010507.1-201ENST00000633895 436 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
VGLL1Q99990 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 AL589702.1-201ENST00000641229 1509 ntBASIC12.11□□□□□ -0.47
VGLL1Q99990 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
VGLL1Q99990 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC12.11□□□□□ -0.47
VGLL1Q99990 AC105250.1-201ENST00000509378 2057 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 AC090616.6-203ENST00000579186 1945 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 AC004870.1-201ENST00000315132 882 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 AC092474.2-201ENST00000424288 719 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 AC079781.3-201ENST00000449110 356 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 UNC93B6-202ENST00000528242 690 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.1□□□□□ -0.47
VGLL1Q99990 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.1□□□□□ -0.47
VGLL1Q99990 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.1□□□□□ -0.47
VGLL1Q99990 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 MIR4321-201ENST00000592276 80 ntBASIC12.1□□□□□ -0.47
VGLL1Q99990 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
VGLL1Q99990 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.1□□□□□ -0.47
VGLL1Q99990 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC12.1□□□□□ -0.47
VGLL1Q99990 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms