Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 HSPA7-201ENST00000445535 1927 ntBASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM4Q8WVI0 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 LINC00265-3P-201ENST00000447588 903 ntBASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 AC106795.1-205ENST00000512851 1056 ntBASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM4Q8WVI0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 AC010327.5-201ENST00000586923 3061 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 ELK2BP-201ENST00000415014 1224 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 TSSC2-201ENST00000450217 709 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 GGTLC5P-201ENST00000617623 998 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 AC097493.4-201ENST00000641197 219 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 LINC01230-201ENST00000625222 3017 ntBASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
SMIM4Q8WVI0 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 AC027601.5-201ENST00000624065 2482 ntBASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC13.59□□□□□ -0.23
SMIM4Q8WVI0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms