Protein–RNA interactions for Protein: Q8WV41

SNX33, Sorting nexin-33, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX33Q8WV41 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 AC010327.4-202ENST00000591484 748 ntBASIC14.41□□□□□ -0.1
SNX33Q8WV41 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.41□□□□□ -0.1
SNX33Q8WV41 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 CICP13-201ENST00000422015 2789 ntBASIC14.41□□□□□ -0.1
SNX33Q8WV41 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 TCAF2P1-201ENST00000291129 2421 ntBASIC14.41□□□□□ -0.1
SNX33Q8WV41 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SNX33Q8WV41 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SNX33Q8WV41 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AC087481.3-201ENST00000602886 1894 ntBASIC14.4□□□□□ -0.1
SNX33Q8WV41 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 TNRC18P2-201ENST00000417666 2714 ntBASIC14.4□□□□□ -0.1
SNX33Q8WV41 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 MIR3909-201ENST00000579518 119 ntBASIC14.4□□□□□ -0.1
SNX33Q8WV41 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AL513190.1-201ENST00000621254 727 ntBASIC14.4□□□□□ -0.1
SNX33Q8WV41 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.4□□□□□ -0.1
SNX33Q8WV41 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SNX33Q8WV41 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SNX33Q8WV41 HMGA1P7-201ENST00000406908 502 ntBASIC14.39□□□□□ -0.11
SNX33Q8WV41 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.39□□□□□ -0.11
SNX33Q8WV41 UPF3AP3-201ENST00000420996 769 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms