Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AC004987.2-201ENST00000395959 1148 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AL139010.1-201ENST00000454878 894 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 BNIP3P1-202ENST00000550043 1585 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 AP3S2-216ENST00000617003 1561 ntBASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.6■□□□□ 0.25
TRAF3IP1Q8TDR0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AC092850.2-201ENST00000623821 2697 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 RPS8P6-201ENST00000426177 609 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AP000347.1-202ENST00000435868 847 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 MIR4469-201ENST00000583919 79 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AC022145.2-201ENST00000598203 171 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 AC105339.1-204ENST00000636249 355 ntBASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TRAF3IP1Q8TDR0 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TRAF3IP1Q8TDR0 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms