Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AC015818.8-201ENST00000587907 1519 ntBASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AC245884.6-201ENST00000515672 1067 ntBASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AC104982.3-201ENST00000581995 514 ntBASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 AC006453.4-201ENST00000636949 1252 ntBASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
CFAP43Q8NDM7 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 HLA-DQB2-229ENST00000411527 1059 ntBASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 AC016700.1-201ENST00000429424 312 ntBASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 FTLP1-201ENST00000449155 526 ntBASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
CFAP43Q8NDM7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 ACTBP8-201ENST00000403258 1108 ntBASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 AC007274.2-201ENST00000421675 662 ntBASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
CFAP43Q8NDM7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 RN7SL720P-201ENST00000488178 304 ntBASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 RN7SL574P-201ENST00000581512 297 ntBASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 NKG7-204ENST00000595217 816 ntTSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 AP003419.4-201ENST00000616071 517 ntBASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC24.27■■□□□ 1.48
CFAP43Q8NDM7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.47
CFAP43Q8NDM7 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CFAP43Q8NDM7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC24.26■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms