Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 GPS2P2-201ENST00000430745 888 ntBASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 KRT8P37-201ENST00000451609 1420 ntBASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 PAUPAR-201ENST00000630360 2965 ntBASIC12.6□□□□□ -0.39
TTC9CQ8N5M4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CD81-202ENST00000381036 880 ntTSL 3 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CNN2P11-201ENST00000429351 262 ntBASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 EEF1DP4-201ENST00000446006 880 ntBASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 AC026150.2-201ENST00000564693 1156 ntBASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
TTC9CQ8N5M4 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
TTC9CQ8N5M4 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.39
TTC9CQ8N5M4 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TTC9CQ8N5M4 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
TTC9CQ8N5M4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
TTC9CQ8N5M4 AL035456.1-201ENST00000456064 1369 ntBASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
TTC9CQ8N5M4 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms