Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AC092364.2-201ENST00000596710 2692 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AL662890.1-201ENST00000396818 632 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AL136309.1-201ENST00000403917 691 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 RPS2P36-201ENST00000456516 831 ntBASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
COL27A1Q8IZC6 AC009090.5-201ENST00000624886 2285 ntBASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 AC008132.1-202ENST00000342005 1389 ntBASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.58□□□□□ -0.07
COL27A1Q8IZC6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 RN7SKP175-201ENST00000408472 289 ntBASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 COX5BP1-201ENST00000507622 393 ntBASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 LINC02447-202ENST00000501888 2146 ntBASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
COL27A1Q8IZC6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 ACTG1P2-201ENST00000415776 1125 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC007274.2-201ENST00000421675 662 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 NUS1P3-201ENST00000423502 862 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 ACTG1P11-201ENST00000425411 1125 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 OR10B1P-201ENST00000601666 907 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC112504.1-201ENST00000623415 1841 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 CHMP1AP1-201ENST00000445563 662 ntBASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
COL27A1Q8IZC6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms