Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AP001063.1-201ENST00000568332 529 ntBASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 MIR3615-201ENST00000581999 87 ntBASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AC005252.2-201ENST00000624630 1141 ntBASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.7■□□□□ 0.1
TMEFF1Q8IYR6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 PHKG1P2-201ENST00000457537 863 ntBASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 AC079316.1-201ENST00000548397 411 ntBASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 REXO1L8P-201ENST00000604378 1897 ntBASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TMEFF1Q8IYR6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TMEFF1Q8IYR6 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms