Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 FAM197Y7-201ENST00000432892 766 ntBASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 MIR3615-201ENST00000581999 87 ntBASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AC138951.2-201ENST00000623455 1161 ntBASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 AL138799.1-201ENST00000448213 1675 ntBASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NPAS4Q8IUM7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 AC145423.3-201ENST00000615987 467 ntBASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 KRT8P35-201ENST00000483942 1338 ntBASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NPAS4Q8IUM7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS4Q8IUM7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
NPAS4Q8IUM7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS4Q8IUM7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
NPAS4Q8IUM7 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 MIR326-201ENST00000362220 95 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AC006033.1-201ENST00000440505 426 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AC078819.1-201ENST00000547454 765 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AC012085.1-201ENST00000548270 765 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 BX539320.1-201ENST00000623759 877 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 AC132938.4-201ENST00000623835 848 ntBASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
NPAS4Q8IUM7 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
NPAS4Q8IUM7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms