Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
COL23A1Q86Y22 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COL23A1Q86Y22 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL23A1Q86Y22 AC068880.1-201ENST00000507289 2297 ntBASIC19.58■□□□□ 0.73
COL23A1Q86Y22 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL23A1Q86Y22 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL23A1Q86Y22 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AC234782.1-201ENST00000451950 919 ntBASIC19.58■□□□□ 0.72
COL23A1Q86Y22 NCK2-206ENST00000522586 490 ntTSL 5 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AP003171.2-201ENST00000528208 925 ntBASIC19.58■□□□□ 0.72
COL23A1Q86Y22 RN7SL713P-201ENST00000582127 302 ntBASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AC026740.1-201ENST00000607068 791 ntBASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AC100757.4-201ENST00000626934 759 ntBASIC19.58■□□□□ 0.72
COL23A1Q86Y22 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL23A1Q86Y22 LTB4R2-202ENST00000528054 3092 ntBASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AL354877.1-201ENST00000424412 413 ntBASIC19.57■□□□□ 0.72
COL23A1Q86Y22 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 HIST2H2BB-201ENST00000449108 381 ntBASIC19.57■□□□□ 0.72
COL23A1Q86Y22 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AL161670.2-201ENST00000557650 1227 ntBASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 PRSS30P-206ENST00000641773 873 ntBASIC19.57■□□□□ 0.72
COL23A1Q86Y22 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AMT-233ENST00000636522 1620 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
COL23A1Q86Y22 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 KRT8P4-201ENST00000509735 1454 ntBASIC19.56■□□□□ 0.72
COL23A1Q86Y22 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 ANKRD30BP2-201ENST00000435744 1610 ntBASIC19.56■□□□□ 0.72
COL23A1Q86Y22 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 TBCB-211ENST00000589996 724 ntTSL 3 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL23A1Q86Y22 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms