Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 FAM58DP-201ENST00000428076 619 ntBASIC14.66□□□□□ -0.06
ZNF550Q7Z398 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 FAM86GP-201ENST00000448322 971 ntBASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 Z92544.3-201ENST00000624747 417 ntBASIC14.66□□□□□ -0.06
ZNF550Q7Z398 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 AC022532.1-201ENST00000624563 1728 ntBASIC14.66□□□□□ -0.06
ZNF550Q7Z398 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.66□□□□□ -0.06
ZNF550Q7Z398 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AL353705.2-201ENST00000428243 662 ntBASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AC011467.4-201ENST00000594891 528 ntBASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AL136982.4-201ENST00000437689 1740 ntBASIC14.65□□□□□ -0.06
ZNF550Q7Z398 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 AC020658.6-201ENST00000623564 1870 ntBASIC14.65□□□□□ -0.06
ZNF550Q7Z398 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ZNF550Q7Z398 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.65□□□□□ -0.06
ZNF550Q7Z398 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZNF550Q7Z398 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.07
ZNF550Q7Z398 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 CYP4F24P-201ENST00000586049 1580 ntBASIC14.64□□□□□ -0.07
ZNF550Q7Z398 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 AL450472.2-201ENST00000603663 1156 ntBASIC14.64□□□□□ -0.07
ZNF550Q7Z398 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.64□□□□□ -0.07
ZNF550Q7Z398 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms