Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC141Q6ZP82 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCDC141Q6ZP82 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 LRRC59-203ENST00000576448 1531 ntBASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 AC084364.1-201ENST00000551967 1556 ntBASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 REEP1-202ENST00000453231 940 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 AKR7A2P1-201ENST00000460134 915 ntBASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 KLK11-210ENST00000600362 759 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCDC141Q6ZP82 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
CCDC141Q6ZP82 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 LINC02447-202ENST00000501888 2146 ntBASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 AC007787.1-201ENST00000588095 1583 ntBASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 AD000864.1-201ENST00000624076 2295 ntBASIC23.2■■□□□ 1.3
CCDC141Q6ZP82 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 FZD10-202ENST00000539839 3282 ntBASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 LSM5-207ENST00000410044 687 ntTSL 3 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 AC106820.3-201ENST00000561653 397 ntBASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 AC244452.3-201ENST00000636814 210 ntBASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC23.19■■□□□ 1.3
CCDC141Q6ZP82 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 RPS15-201ENST00000233609 534 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC23.18■■□□□ 1.3
CCDC141Q6ZP82 NCK2-206ENST00000522586 490 ntTSL 5 BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms