Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.27■□□□□ 0.2
CASC4Q6P4E1 AC092127.1-201ENST00000567093 3455 ntBASIC16.27■□□□□ 0.19
CASC4Q6P4E1 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 AC020658.6-201ENST00000623564 1870 ntBASIC16.27■□□□□ 0.19
CASC4Q6P4E1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CASC4Q6P4E1 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AKAP8P1-201ENST00000434743 1349 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TFAMP1-201ENST00000412727 736 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AL355306.1-201ENST00000415580 579 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 FAM58CP-201ENST00000435741 640 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AC027307.2-201ENST00000591252 911 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AC073389.1-201ENST00000595595 795 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 AC087481.3-201ENST00000602886 1894 ntBASIC16.26■□□□□ 0.19
CASC4Q6P4E1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CASC4Q6P4E1 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 RNA5SP410-201ENST00000516285 106 ntBASIC16.25■□□□□ 0.19
CASC4Q6P4E1 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 AC243562.2-201ENST00000561247 970 ntBASIC16.25■□□□□ 0.19
CASC4Q6P4E1 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.25■□□□□ 0.19
CASC4Q6P4E1 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms