Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CCDC58Q4VC31 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AP003680.1-201ENST00000598970 3660 ntBASIC14.28□□□□□ -0.12
CCDC58Q4VC31 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 HIST2H3DP1-201ENST00000401004 416 ntBASIC14.28□□□□□ -0.12
CCDC58Q4VC31 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 KRT18P21-201ENST00000515767 1272 ntBASIC14.28□□□□□ -0.12
CCDC58Q4VC31 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AL356585.2-201ENST00000625078 2396 ntBASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AL358472.4-201ENST00000633140 710 ntBASIC14.28□□□□□ -0.12
CCDC58Q4VC31 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CCDC58Q4VC31 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 AP001282.1-201ENST00000531301 1499 ntBASIC14.27□□□□□ -0.12
CCDC58Q4VC31 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CCDC58Q4VC31 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CCDC58Q4VC31 MRPL20P1-201ENST00000400819 433 ntBASIC14.27□□□□□ -0.13
CCDC58Q4VC31 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms