Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.43■□□□□ 0.38
KCNA1Q09470 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.43■□□□□ 0.38
KCNA1Q09470 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
KCNA1Q09470 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
KCNA1Q09470 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 AC136621.1-201ENST00000624017 2304 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC17.42■□□□□ 0.38
KCNA1Q09470 AC009477.1-201ENST00000452936 217 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 AC004890.2-204ENST00000481968 304 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 MIR6069-201ENST00000620069 79 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 AC105250.1-201ENST00000509378 2057 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 ILF3-AS1-201ENST00000591501 1983 ntBASIC17.42■□□□□ 0.38
KCNA1Q09470 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
KCNA1Q09470 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
KCNA1Q09470 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC17.42■□□□□ 0.38
KCNA1Q09470 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 KRT18P64-201ENST00000434946 1219 ntBASIC17.41■□□□□ 0.38
KCNA1Q09470 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 RN7SL618P-201ENST00000477850 296 ntBASIC17.41■□□□□ 0.38
KCNA1Q09470 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 AL109936.8-201ENST00000641772 604 ntBASIC17.41■□□□□ 0.38
KCNA1Q09470 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
KCNA1Q09470 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC17.41■□□□□ 0.38
KCNA1Q09470 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
KCNA1Q09470 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms