Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ETV2-207ENST00000619399 994 ntTSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
COL16A1Q07092 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC20.76■□□□□ 0.91
COL16A1Q07092 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
COL16A1Q07092 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 RBM38-204ENST00000371219 760 ntTSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC010141.1-201ENST00000411585 623 ntBASIC20.75■□□□□ 0.91
COL16A1Q07092 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AL603764.1-201ENST00000636452 321 ntBASIC20.75■□□□□ 0.91
COL16A1Q07092 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 KRT8P21-201ENST00000430398 1491 ntBASIC20.75■□□□□ 0.91
COL16A1Q07092 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC20.75■□□□□ 0.91
COL16A1Q07092 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.75■□□□□ 0.91
COL16A1Q07092 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
COL16A1Q07092 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 FAM90A7P-201ENST00000382628 1395 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 FAM90A23P-201ENST00000400136 1395 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 FAM90A2P-201ENST00000511144 1395 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 FAM90A25P-201ENST00000528404 1395 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
COL16A1Q07092 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AC141586.5-201ENST00000624546 2050 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 AP000593.2-201ENST00000542775 1433 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC20.74■□□□□ 0.91
COL16A1Q07092 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AC100827.2-201ENST00000563214 1194 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.74■□□□□ 0.91
COL16A1Q07092 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.74■□□□□ 0.91
COL16A1Q07092 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 AC025262.2-201ENST00000623975 1056 ntBASIC20.74■□□□□ 0.91
COL16A1Q07092 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
COL16A1Q07092 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
COL16A1Q07092 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC20.73■□□□□ 0.91
COL16A1Q07092 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL16A1Q07092 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC20.73■□□□□ 0.91
COL16A1Q07092 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.73■□□□□ 0.91
COL16A1Q07092 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC20.73■□□□□ 0.91
COL16A1Q07092 AC027139.1-201ENST00000565286 951 ntBASIC20.73■□□□□ 0.91
COL16A1Q07092 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL16A1Q07092 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC20.73■□□□□ 0.91
COL16A1Q07092 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL16A1Q07092 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC20.73■□□□□ 0.91
COL16A1Q07092 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms