Protein–RNA interactions for Protein: Q03692

COL10A1, Collagen alpha-1(X) chain, humanhuman

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL10A1Q03692 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.47□□□□□ -0.25
COL10A1Q03692 ALG1L8P-201ENST00000533887 760 ntBASIC13.47□□□□□ -0.25
COL10A1Q03692 AC093520.2-201ENST00000561830 333 ntBASIC13.47□□□□□ -0.25
COL10A1Q03692 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
COL10A1Q03692 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.47□□□□□ -0.25
COL10A1Q03692 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.47□□□□□ -0.25
COL10A1Q03692 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.47□□□□□ -0.25
COL10A1Q03692 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.47□□□□□ -0.25
COL10A1Q03692 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.47□□□□□ -0.25
COL10A1Q03692 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
COL10A1Q03692 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.47□□□□□ -0.25
COL10A1Q03692 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
COL10A1Q03692 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
COL10A1Q03692 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 RBPMS2P1-201ENST00000437762 623 ntBASIC13.46□□□□□ -0.25
COL10A1Q03692 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.46□□□□□ -0.25
COL10A1Q03692 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.46□□□□□ -0.25
COL10A1Q03692 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.46□□□□□ -0.25
COL10A1Q03692 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.46□□□□□ -0.25
COL10A1Q03692 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.46□□□□□ -0.25
COL10A1Q03692 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
COL10A1Q03692 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
COL10A1Q03692 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.46□□□□□ -0.25
COL10A1Q03692 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC13.46□□□□□ -0.25
COL10A1Q03692 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
COL10A1Q03692 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
COL10A1Q03692 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
COL10A1Q03692 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.46□□□□□ -0.26
COL10A1Q03692 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.26
COL10A1Q03692 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.46□□□□□ -0.26
COL10A1Q03692 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
COL10A1Q03692 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 FES-204ENST00000414248 2327 ntTSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
COL10A1Q03692 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
COL10A1Q03692 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
COL10A1Q03692 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
COL10A1Q03692 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms