Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
SRP54P61011 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.69■□□□□ 0.1
SRP54P61011 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC15.69■□□□□ 0.1
SRP54P61011 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SRP54P61011 AC099568.2-201ENST00000609194 695 ntBASIC15.69■□□□□ 0.1
SRP54P61011 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC15.69■□□□□ 0.1
SRP54P61011 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SRP54P61011 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SRP54P61011 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SRP54P61011 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
SRP54P61011 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
SRP54P61011 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRP54P61011 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
SRP54P61011 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 AC134407.2-201ENST00000625089 1978 ntBASIC15.68■□□□□ 0.1
SRP54P61011 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SRP54P61011 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 AP006294.1-201ENST00000415407 339 ntBASIC15.68■□□□□ 0.1
SRP54P61011 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
SRP54P61011 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.68■□□□□ 0.1
SRP54P61011 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.68■□□□□ 0.1
SRP54P61011 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.68■□□□□ 0.1
SRP54P61011 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC15.68■□□□□ 0.1
SRP54P61011 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SRP54P61011 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.67■□□□□ 0.1
SRP54P61011 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
SRP54P61011 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC15.67■□□□□ 0.1
SRP54P61011 MYCLP2-201ENST00000449268 967 ntBASIC15.67■□□□□ 0.1
SRP54P61011 RN7SL752P-201ENST00000463779 287 ntBASIC15.67■□□□□ 0.1
SRP54P61011 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 AC123567.1-201ENST00000548294 1261 ntBASIC15.67■□□□□ 0.1
SRP54P61011 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SRP54P61011 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP54P61011 WASH4P-201ENST00000564273 1246 ntBASIC15.67■□□□□ 0.1
SRP54P61011 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP54P61011 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC15.67■□□□□ 0.1
SRP54P61011 LINC01115-203ENST00000606068 577 ntBASIC15.67■□□□□ 0.1
SRP54P61011 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
SRP54P61011 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SRP54P61011 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms