Protein–RNA interactions for Protein: P55789

GFER, FAD-linked sulfhydryl oxidase ALR, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFERP55789 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
GFERP55789 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC15.1■□□□□ 0.01
GFERP55789 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.1■□□□□ 0.01
GFERP55789 AL162726.2-201ENST00000438986 1017 ntBASIC15.1■□□□□ 0.01
GFERP55789 KRT18P43-201ENST00000469825 1281 ntBASIC15.1■□□□□ 0.01
GFERP55789 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.1■□□□□ 0.01
GFERP55789 AC106886.1-201ENST00000568660 600 ntBASIC15.1■□□□□ 0.01
GFERP55789 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.1■□□□□ 0.01
GFERP55789 MIR4313-201ENST00000580760 101 ntBASIC15.1■□□□□ 0.01
GFERP55789 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.1■□□□□ 0.01
GFERP55789 AC017083.2-201ENST00000608069 979 ntBASIC15.1■□□□□ 0.01
GFERP55789 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.1■□□□□ 0.01
GFERP55789 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.1■□□□□ 0.01
GFERP55789 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GFERP55789 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.1■□□□□ 0.01
GFERP55789 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 LINC02447-202ENST00000501888 2146 ntBASIC15.1■□□□□ 0.01
GFERP55789 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.1■□□□□ 0.01
GFERP55789 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
GFERP55789 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
GFERP55789 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
GFERP55789 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC15.09■□□□□ 0.01
GFERP55789 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 AC134915.1-201ENST00000426461 574 ntBASIC15.09■□□□□ 0.01
GFERP55789 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.09■□□□□ 0.01
GFERP55789 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.09■□□□□ 0.01
GFERP55789 AC124283.3-201ENST00000570869 594 ntBASIC15.09■□□□□ 0.01
GFERP55789 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.09■□□□□ 0.01
GFERP55789 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.09■□□□□ 0.01
GFERP55789 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 ABBA01031660.1-201ENST00000635219 756 ntBASIC15.09■□□□□ 0.01
GFERP55789 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.09■□□□□ 0.01
GFERP55789 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
GFERP55789 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 HNRNPA1P48-201ENST00000562726 1377 ntBASIC15.09■□□□□ 0.01
GFERP55789 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
GFERP55789 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
GFERP55789 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC15.08■□□□□ 0.01
GFERP55789 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
GFERP55789 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.08■□□□□ 0.01
GFERP55789 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.08■□□□□ 0.01
GFERP55789 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
GFERP55789 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GFERP55789 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
GFERP55789 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
GFERP55789 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.08■□□□□ 0
GFERP55789 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.08■□□□□ 0
GFERP55789 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.08■□□□□ 0
GFERP55789 MIR1909-201ENST00000411312 80 ntBASIC15.08■□□□□ 0
GFERP55789 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC15.08■□□□□ 0
GFERP55789 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
GFERP55789 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC15.08■□□□□ 0
GFERP55789 CROCCP4-201ENST00000457096 498 ntBASIC15.08■□□□□ 0
GFERP55789 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms