Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AC009542.2-202ENST00000619004 1067 ntBASIC17.44■□□□□ 0.38
CPT1AP50416 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 AGGF1P2-201ENST00000426656 2106 ntBASIC17.44■□□□□ 0.38
CPT1AP50416 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CPT1AP50416 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CPT1AP50416 AC011676.5-201ENST00000624864 2660 ntBASIC17.44■□□□□ 0.38
CPT1AP50416 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.44■□□□□ 0.38
CPT1AP50416 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.43■□□□□ 0.38
CPT1AP50416 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 RPL13AP20-201ENST00000459725 609 ntBASIC17.43■□□□□ 0.38
CPT1AP50416 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC17.43■□□□□ 0.38
CPT1AP50416 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.43■□□□□ 0.38
CPT1AP50416 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.43■□□□□ 0.38
CPT1AP50416 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.43■□□□□ 0.38
CPT1AP50416 AC103810.3-201ENST00000583567 96 ntBASIC17.43■□□□□ 0.38
CPT1AP50416 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 AC244093.1-201ENST00000610837 814 ntBASIC17.43■□□□□ 0.38
CPT1AP50416 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC17.43■□□□□ 0.38
CPT1AP50416 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CPT1AP50416 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CPT1AP50416 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 GUK1-206ENST00000366723 845 ntTSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 GAPDHP40-201ENST00000505218 1006 ntBASIC17.42■□□□□ 0.38
CPT1AP50416 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.42■□□□□ 0.38
CPT1AP50416 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC17.42■□□□□ 0.38
CPT1AP50416 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
CPT1AP50416 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CPT1AP50416 AC080080.1-201ENST00000625121 2420 ntBASIC17.41■□□□□ 0.38
CPT1AP50416 AC020916.1-201ENST00000587762 1774 ntBASIC17.41■□□□□ 0.38
CPT1AP50416 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CPT1AP50416 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CPT1AP50416 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CPT1AP50416 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms