Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC15.63■□□□□ 0.09
CXCL12P48061 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.63■□□□□ 0.09
CXCL12P48061 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
CXCL12P48061 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.63■□□□□ 0.09
CXCL12P48061 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.63■□□□□ 0.09
CXCL12P48061 AC138627.1-207ENST00000641560 1006 ntBASIC15.63■□□□□ 0.09
CXCL12P48061 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CXCL12P48061 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCL12P48061 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCL12P48061 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CXCL12P48061 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CXCL12P48061 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 AC106820.2-201ENST00000563775 3264 ntBASIC15.62■□□□□ 0.09
CXCL12P48061 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CXCL12P48061 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
CXCL12P48061 FXNP2-201ENST00000411625 547 ntBASIC15.62■□□□□ 0.09
CXCL12P48061 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.62■□□□□ 0.09
CXCL12P48061 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.62■□□□□ 0.09
CXCL12P48061 AC114812.1-204ENST00000449669 728 ntBASIC15.62■□□□□ 0.09
CXCL12P48061 AL451050.2-201ENST00000606967 682 ntBASIC15.62■□□□□ 0.09
CXCL12P48061 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
CXCL12P48061 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL12P48061 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.62■□□□□ 0.09
CXCL12P48061 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CXCL12P48061 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 ACTBP8-201ENST00000403258 1108 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 KRTAP19-9P-201ENST00000421795 191 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 CNN2P10-201ENST00000443067 918 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL12P48061 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL12P48061 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.61■□□□□ 0.09
CXCL12P48061 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 RN7SL48P-201ENST00000579283 293 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 ECM1P1-201ENST00000604092 1279 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.61■□□□□ 0.09
CXCL12P48061 AC018735.1-201ENST00000437208 1502 ntBASIC15.61■□□□□ 0.09
CXCL12P48061 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CXCL12P48061 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CXCL12P48061 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms