Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
NKX2-1P43699 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-1P43699 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-1P43699 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX2-1P43699 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 FICD-205ENST00000552758 603 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
NKX2-1P43699 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC13.08□□□□□ -0.32
NKX2-1P43699 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.08□□□□□ -0.32
NKX2-1P43699 AC007191.1-201ENST00000623179 2995 ntBASIC13.08□□□□□ -0.32
NKX2-1P43699 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
NKX2-1P43699 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.08□□□□□ -0.32
NKX2-1P43699 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 AP001282.1-201ENST00000531301 1499 ntBASIC13.08□□□□□ -0.32
NKX2-1P43699 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.08□□□□□ -0.32
NKX2-1P43699 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-1P43699 LINC00552-201ENST00000625151 2579 ntBASIC13.08□□□□□ -0.32
NKX2-1P43699 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
NKX2-1P43699 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.08□□□□□ -0.32
NKX2-1P43699 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
NKX2-1P43699 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 MMP17-203ENST00000535004 719 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 MIR3180-1-201ENST00000580374 94 ntBASIC13.07□□□□□ -0.32
NKX2-1P43699 MIR3180-3-201ENST00000584616 94 ntBASIC13.07□□□□□ -0.32
NKX2-1P43699 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 NPAP1P7-201ENST00000613027 823 ntBASIC13.07□□□□□ -0.32
NKX2-1P43699 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
NKX2-1P43699 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.07□□□□□ -0.32
NKX2-1P43699 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
NKX2-1P43699 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC13.07□□□□□ -0.32
NKX2-1P43699 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms