Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.66□□□□□ -0.06
SLC1A3P43003 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
SLC1A3P43003 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC134407.2-201ENST00000625089 1978 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC020658.6-201ENST00000623564 1870 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC1A3P43003 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
SLC1A3P43003 AL627223.1-201ENST00000416693 442 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 KRT18P32-201ENST00000424695 1287 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC1A3P43003 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.65□□□□□ -0.06
SLC1A3P43003 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC1A3P43003 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC1A3P43003 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.65□□□□□ -0.06
SLC1A3P43003 RARRES2P9-201ENST00000565168 469 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.65□□□□□ -0.06
SLC1A3P43003 AC026979.3-201ENST00000607315 403 ntBASIC14.65□□□□□ -0.06
SLC1A3P43003 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
SLC1A3P43003 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
SLC1A3P43003 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
SLC1A3P43003 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.65□□□□□ -0.06
SLC1A3P43003 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 AC006486.2-201ENST00000624246 2199 ntBASIC14.64□□□□□ -0.07
SLC1A3P43003 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 AC004987.2-201ENST00000395959 1148 ntBASIC14.64□□□□□ -0.07
SLC1A3P43003 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
SLC1A3P43003 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.64□□□□□ -0.07
SLC1A3P43003 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.64□□□□□ -0.07
SLC1A3P43003 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 FLJ16779-201ENST00000612722 7638 ntBASIC14.64□□□□□ -0.07
SLC1A3P43003 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC1A3P43003 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms