Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.55■□□□□ 0.4
CTGFP29279 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 AC007274.2-201ENST00000421675 662 ntBASIC17.55■□□□□ 0.4
CTGFP29279 AL354877.1-201ENST00000424412 413 ntBASIC17.55■□□□□ 0.4
CTGFP29279 EIF3FP3-201ENST00000434851 1086 ntBASIC17.55■□□□□ 0.4
CTGFP29279 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC17.55■□□□□ 0.4
CTGFP29279 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 AC025181.2-201ENST00000606994 802 ntBASIC17.55■□□□□ 0.4
CTGFP29279 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.55■□□□□ 0.4
CTGFP29279 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.55■□□□□ 0.4
CTGFP29279 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CTGFP29279 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CTGFP29279 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.54■□□□□ 0.4
CTGFP29279 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.54■□□□□ 0.4
CTGFP29279 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.54■□□□□ 0.4
CTGFP29279 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC17.54■□□□□ 0.4
CTGFP29279 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC17.54■□□□□ 0.4
CTGFP29279 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.54■□□□□ 0.4
CTGFP29279 MIR4750-201ENST00000584564 56 ntBASIC17.54■□□□□ 0.4
CTGFP29279 AC026740.1-201ENST00000607068 791 ntBASIC17.54■□□□□ 0.4
CTGFP29279 AL353726.2-201ENST00000623259 884 ntBASIC17.54■□□□□ 0.4
CTGFP29279 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.54■□□□□ 0.4
CTGFP29279 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CTGFP29279 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CTGFP29279 AC106886.4-201ENST00000623557 2502 ntBASIC17.54■□□□□ 0.4
CTGFP29279 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.54■□□□□ 0.4
CTGFP29279 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CTGFP29279 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTGFP29279 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 LRRC59-203ENST00000576448 1531 ntBASIC17.53■□□□□ 0.4
CTGFP29279 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 AC018695.7-201ENST00000624587 2492 ntBASIC17.53■□□□□ 0.4
CTGFP29279 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 AC022188.1-201ENST00000620960 1664 ntBASIC17.53■□□□□ 0.4
CTGFP29279 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTGFP29279 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 AL139094.1-201ENST00000405549 1188 ntBASIC17.53■□□□□ 0.4
CTGFP29279 AL596276.2-201ENST00000447525 331 ntBASIC17.53■□□□□ 0.4
CTGFP29279 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CTGFP29279 AC005740.2-201ENST00000511085 419 ntBASIC17.53■□□□□ 0.4
CTGFP29279 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC17.53■□□□□ 0.4
CTGFP29279 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC17.53■□□□□ 0.4
CTGFP29279 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.53■□□□□ 0.4
CTGFP29279 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.53■□□□□ 0.4
CTGFP29279 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.53■□□□□ 0.4
CTGFP29279 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.53■□□□□ 0.4
CTGFP29279 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CTGFP29279 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC17.53■□□□□ 0.4
CTGFP29279 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms