Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 RPL5P21-201ENST00000404620 815 ntBASIC13.65□□□□□ -0.22
CCL1P22362 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 POLD2P1-201ENST00000511220 997 ntBASIC13.65□□□□□ -0.22
CCL1P22362 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL1P22362 ALG1L8P-201ENST00000533887 760 ntBASIC13.65□□□□□ -0.22
CCL1P22362 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCL1P22362 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC13.65□□□□□ -0.22
CCL1P22362 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL1P22362 AC105021.1-202ENST00000570572 669 ntBASIC13.65□□□□□ -0.22
CCL1P22362 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL1P22362 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 AL513210.1-201ENST00000629608 234 ntBASIC13.65□□□□□ -0.22
CCL1P22362 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 TSPY26P-202ENST00000565928 3884 ntBASIC13.65□□□□□ -0.22
CCL1P22362 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 AC091951.1-201ENST00000512854 2465 ntBASIC13.65□□□□□ -0.22
CCL1P22362 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL1P22362 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC13.65□□□□□ -0.22
CCL1P22362 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL1P22362 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCL1P22362 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
CCL1P22362 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 AGAP7P-201ENST00000582299 2062 ntBASIC13.64□□□□□ -0.23
CCL1P22362 AGAP14-201ENST00000624701 2060 ntBASIC13.64□□□□□ -0.23
CCL1P22362 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL1P22362 HIST3H2BA-201ENST00000436555 524 ntBASIC13.64□□□□□ -0.23
CCL1P22362 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL1P22362 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 YBX1P5-201ENST00000509441 847 ntBASIC13.64□□□□□ -0.23
CCL1P22362 GATD1-206ENST00000526325 756 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL1P22362 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL1P22362 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.64□□□□□ -0.23
CCL1P22362 AC018529.1-201ENST00000613063 361 ntBASIC13.64□□□□□ -0.23
CCL1P22362 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL1P22362 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL1P22362 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL1P22362 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms