Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
UBL4AP11441 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.78□□□□□ -0.04
UBL4AP11441 AC243562.2-201ENST00000561247 970 ntBASIC14.78□□□□□ -0.04
UBL4AP11441 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.78□□□□□ -0.04
UBL4AP11441 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 AL359183.1-201ENST00000623796 2132 ntBASIC14.78□□□□□ -0.04
UBL4AP11441 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
UBL4AP11441 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
UBL4AP11441 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
UBL4AP11441 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.77□□□□□ -0.04
UBL4AP11441 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
UBL4AP11441 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
UBL4AP11441 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC14.77□□□□□ -0.04
UBL4AP11441 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 AC254562.1-201ENST00000417586 456 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 AC004967.1-201ENST00000453589 447 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 ALG1L8P-201ENST00000533887 760 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.77□□□□□ -0.05
UBL4AP11441 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.77□□□□□ -0.05
UBL4AP11441 AC093520.2-201ENST00000561830 333 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 AC026979.3-201ENST00000607315 403 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 AC068587.6-202ENST00000641839 5619 ntBASIC14.77□□□□□ -0.05
UBL4AP11441 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.77□□□□□ -0.05
UBL4AP11441 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
UBL4AP11441 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
UBL4AP11441 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.77□□□□□ -0.05
UBL4AP11441 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL4AP11441 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 AC134407.2-201ENST00000625089 1978 ntBASIC14.76□□□□□ -0.05
UBL4AP11441 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.76□□□□□ -0.05
UBL4AP11441 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.76□□□□□ -0.05
UBL4AP11441 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
UBL4AP11441 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.76□□□□□ -0.05
UBL4AP11441 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
UBL4AP11441 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
UBL4AP11441 MIR1233-2-201ENST00000408138 82 ntBASIC14.76□□□□□ -0.05
UBL4AP11441 MIR1233-1-201ENST00000408722 82 ntBASIC14.76□□□□□ -0.05
UBL4AP11441 FAM58DP-201ENST00000428076 619 ntBASIC14.76□□□□□ -0.05
UBL4AP11441 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.76□□□□□ -0.05
UBL4AP11441 AP006288.1-201ENST00000446065 395 ntBASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms