Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 AC026316.1-201ENST00000398900 414 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 KRT18P66-201ENST00000452970 1269 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 CEP164P1-201ENST00000455142 418 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 RN7SL8P-201ENST00000461771 266 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
SP9P0CG40 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.37■□□□□ 0.05
SP9P0CG40 WDR7-208ENST00000589935 544 ntTSL 4 BASIC15.37■□□□□ 0.05
SP9P0CG40 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.37■□□□□ 0.05
SP9P0CG40 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 AC020922.3-201ENST00000595064 547 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.37■□□□□ 0.05
SP9P0CG40 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
SP9P0CG40 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.37■□□□□ 0.05
SP9P0CG40 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC15.37■□□□□ 0.05
SP9P0CG40 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.37■□□□□ 0.05
SP9P0CG40 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
SP9P0CG40 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SP9P0CG40 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SP9P0CG40 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 AC234644.1-201ENST00000406065 370 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC15.36■□□□□ 0.05
SP9P0CG40 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC15.36■□□□□ 0.05
SP9P0CG40 AL353637.1-201ENST00000451571 732 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 RNMTL1P1-201ENST00000454103 560 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.36■□□□□ 0.05
SP9P0CG40 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.36■□□□□ 0.05
SP9P0CG40 IGLV3-15-201ENST00000518356 244 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.36■□□□□ 0.05
SP9P0CG40 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.36■□□□□ 0.05
SP9P0CG40 RN7SL163P-201ENST00000583100 276 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 BNIP3P13-201ENST00000599968 566 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AC012044.1-201ENST00000603431 297 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AC025181.2-201ENST00000606994 802 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 PRSS30P-206ENST00000641773 873 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 AC004923.1-202ENST00000642106 209 ntBASIC15.36■□□□□ 0.05
SP9P0CG40 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 C12orf76-207ENST00000549724 1302 ntTSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
SP9P0CG40 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
SP9P0CG40 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
SP9P0CG40 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SP9P0CG40 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.35■□□□□ 0.05
SP9P0CG40 AL157791.1-201ENST00000553667 1699 ntBASIC15.35■□□□□ 0.05
SP9P0CG40 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.35■□□□□ 0.05
SP9P0CG40 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SP9P0CG40 NPPA-201ENST00000376476 728 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms