Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC17.25■□□□□ 0.35
CCDC172P0C7W6 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 AC004987.2-201ENST00000395959 1148 ntBASIC17.24■□□□□ 0.35
CCDC172P0C7W6 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 AC040169.1-201ENST00000565382 521 ntBASIC17.24■□□□□ 0.35
CCDC172P0C7W6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.24■□□□□ 0.35
CCDC172P0C7W6 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCDC172P0C7W6 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 FAM220BP-201ENST00000377689 816 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 FAM58CP-201ENST00000435741 640 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 ACTG1P14-201ENST00000446382 1122 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 RNA5SP410-201ENST00000516285 106 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 SLC25A1P1-201ENST00000528351 927 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.23■□□□□ 0.35
CCDC172P0C7W6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.23■□□□□ 0.35
CCDC172P0C7W6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC172P0C7W6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms