Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
RETP07949 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16■□□□□ 0.15
RETP07949 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 RN7SL399P-201ENST00000471648 279 ntBASIC16■□□□□ 0.15
RETP07949 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC16■□□□□ 0.15
RETP07949 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
RETP07949 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
RETP07949 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16■□□□□ 0.15
RETP07949 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
RETP07949 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16■□□□□ 0.15
RETP07949 AC079328.2-201ENST00000561241 3354 ntBASIC16■□□□□ 0.15
RETP07949 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 AL589702.1-201ENST00000641229 1509 ntBASIC15.99■□□□□ 0.15
RETP07949 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.99■□□□□ 0.15
RETP07949 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.99■□□□□ 0.15
RETP07949 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RETP07949 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
RETP07949 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.99■□□□□ 0.15
RETP07949 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
RETP07949 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
RETP07949 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
RETP07949 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 AL442647.2-201ENST00000429864 857 ntBASIC15.99■□□□□ 0.15
RETP07949 YBX1P6-201ENST00000442962 1002 ntBASIC15.99■□□□□ 0.15
RETP07949 AC007551.1-201ENST00000457394 519 ntBASIC15.99■□□□□ 0.15
RETP07949 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.99■□□□□ 0.15
RETP07949 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.99■□□□□ 0.15
RETP07949 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.99■□□□□ 0.15
RETP07949 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.99■□□□□ 0.15
RETP07949 AC025048.3-201ENST00000590609 569 ntBASIC15.99■□□□□ 0.15
RETP07949 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.99■□□□□ 0.15
RETP07949 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 AC005702.4-201ENST00000618393 416 ntBASIC15.99■□□□□ 0.15
RETP07949 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RETP07949 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC15.98■□□□□ 0.15
RETP07949 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.98■□□□□ 0.15
RETP07949 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.98■□□□□ 0.15
RETP07949 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
RETP07949 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RETP07949 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
RETP07949 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
RETP07949 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RETP07949 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RETP07949 AC005229.1-201ENST00000392885 409 ntBASIC15.98■□□□□ 0.15
RETP07949 BCRP2-202ENST00000447763 634 ntBASIC15.98■□□□□ 0.15
RETP07949 AC093724.1-201ENST00000448659 1027 ntBASIC15.98■□□□□ 0.15
RETP07949 KRT8P13-201ENST00000463294 1010 ntBASIC15.98■□□□□ 0.15
RETP07949 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
RETP07949 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC15.98■□□□□ 0.15
RETP07949 BCRP6-201ENST00000510112 632 ntBASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms