Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.98■□□□□ 0.63
POLR3DP05423 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC18.98■□□□□ 0.63
POLR3DP05423 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
POLR3DP05423 AL365203.3-201ENST00000609742 2057 ntBASIC18.97■□□□□ 0.63
POLR3DP05423 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 SLC7A15P-201ENST00000424028 1363 ntBASIC18.97■□□□□ 0.63
POLR3DP05423 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 GAPDHP21-201ENST00000450301 1010 ntBASIC18.97■□□□□ 0.63
POLR3DP05423 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR3DP05423 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.97■□□□□ 0.63
POLR3DP05423 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR3DP05423 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
POLR3DP05423 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.97■□□□□ 0.63
POLR3DP05423 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
POLR3DP05423 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
POLR3DP05423 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
POLR3DP05423 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
POLR3DP05423 MEP1AP4-201ENST00000423244 1087 ntBASIC18.96■□□□□ 0.63
POLR3DP05423 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.96■□□□□ 0.63
POLR3DP05423 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 AC055876.2-201ENST00000531834 546 ntBASIC18.96■□□□□ 0.63
POLR3DP05423 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
POLR3DP05423 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.96■□□□□ 0.63
POLR3DP05423 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.96■□□□□ 0.63
POLR3DP05423 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
POLR3DP05423 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 SUPT20HL2-201ENST00000486479 2409 ntBASIC18.96■□□□□ 0.63
POLR3DP05423 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
POLR3DP05423 Z97205.2-201ENST00000564697 1639 ntBASIC18.96■□□□□ 0.63
POLR3DP05423 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.95■□□□□ 0.62
POLR3DP05423 AL603832.2-201ENST00000566195 2125 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms