Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA1P02708 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA1P02708 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC17.12■□□□□ 0.33
CHRNA1P02708 RHOXF1P1-202ENST00000635473 501 ntBASIC17.12■□□□□ 0.33
CHRNA1P02708 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRNA1P02708 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.12■□□□□ 0.33
CHRNA1P02708 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CHRNA1P02708 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CHRNA1P02708 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNA1P02708 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 NKILA-202ENST00000614771 2598 ntBASIC17.12■□□□□ 0.33
CHRNA1P02708 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.12■□□□□ 0.33
CHRNA1P02708 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CHRNA1P02708 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.12■□□□□ 0.33
CHRNA1P02708 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHRNA1P02708 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 AL662844.4-201ENST00000606367 2838 ntBASIC17.11■□□□□ 0.33
CHRNA1P02708 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
CHRNA1P02708 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA1P02708 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHRNA1P02708 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA1P02708 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA1P02708 CNN2P8-201ENST00000421872 913 ntBASIC17.11■□□□□ 0.33
CHRNA1P02708 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA1P02708 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA1P02708 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.11■□□□□ 0.33
CHRNA1P02708 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 AC079316.1-201ENST00000548397 411 ntBASIC17.11■□□□□ 0.33
CHRNA1P02708 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.11■□□□□ 0.33
CHRNA1P02708 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.11■□□□□ 0.33
CHRNA1P02708 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.11■□□□□ 0.33
CHRNA1P02708 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CHRNA1P02708 AC084018.2-201ENST00000613093 2607 ntBASIC17.11■□□□□ 0.33
CHRNA1P02708 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHRNA1P02708 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHRNA1P02708 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
CHRNA1P02708 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNA1P02708 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.1■□□□□ 0.33
CHRNA1P02708 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 AL606495.2-201ENST00000605867 535 ntBASIC17.1■□□□□ 0.33
CHRNA1P02708 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 KRT8P44-201ENST00000441609 1350 ntBASIC17.1■□□□□ 0.33
CHRNA1P02708 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CHRNA1P02708 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.1■□□□□ 0.33
CHRNA1P02708 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.1■□□□□ 0.33
CHRNA1P02708 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms