Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
KRT6AP02538 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 LRRFIP1P1-201ENST00000498774 2246 ntBASIC15.45■□□□□ 0.06
KRT6AP02538 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
KRT6AP02538 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
KRT6AP02538 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 PPT1-215ENST00000641471 2368 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.44■□□□□ 0.06
KRT6AP02538 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 RPS8P6-201ENST00000426177 609 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.44■□□□□ 0.06
KRT6AP02538 SPCS2P4-201ENST00000436160 681 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 AC079140.1-201ENST00000508039 487 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.44■□□□□ 0.06
KRT6AP02538 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.44■□□□□ 0.06
KRT6AP02538 C20orf181-201ENST00000623918 480 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.44■□□□□ 0.06
KRT6AP02538 AC136621.1-201ENST00000624017 2304 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
KRT6AP02538 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 REXO1L1P-202ENST00000608646 1974 ntBASIC15.44■□□□□ 0.06
KRT6AP02538 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
KRT6AP02538 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
KRT6AP02538 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 AC013268.4-201ENST00000637413 2228 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.43■□□□□ 0.06
KRT6AP02538 AC004832.2-201ENST00000426397 482 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 MKNK2P1-201ENST00000437526 628 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 TIMM8BP1-201ENST00000452384 211 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.43■□□□□ 0.06
KRT6AP02538 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.43■□□□□ 0.06
KRT6AP02538 AL139010.1-201ENST00000454878 894 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 KRT8P48-201ENST00000515599 1220 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.43■□□□□ 0.06
KRT6AP02538 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 AC026979.3-201ENST00000607315 403 ntBASIC15.43■□□□□ 0.06
KRT6AP02538 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
KRT6AP02538 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.43■□□□□ 0.06
KRT6AP02538 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms