Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MIR4313-201ENST00000580760 101 ntBASIC15.97■□□□□ 0.15
RFPL1O75677 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.97■□□□□ 0.15
RFPL1O75677 AC093512.1-201ENST00000617969 520 ntBASIC15.97■□□□□ 0.15
RFPL1O75677 AC105339.1-204ENST00000636249 355 ntBASIC15.97■□□□□ 0.15
RFPL1O75677 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFPL1O75677 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RFPL1O75677 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFPL1O75677 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFPL1O75677 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.97■□□□□ 0.15
RFPL1O75677 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RFPL1O75677 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RFPL1O75677 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.97■□□□□ 0.15
RFPL1O75677 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.97■□□□□ 0.15
RFPL1O75677 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RFPL1O75677 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.97■□□□□ 0.15
RFPL1O75677 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RFPL1O75677 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.96■□□□□ 0.15
RFPL1O75677 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RFPL1O75677 CALY-203ENST00000368558 825 ntTSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.96■□□□□ 0.15
RFPL1O75677 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.96■□□□□ 0.15
RFPL1O75677 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.96■□□□□ 0.15
RFPL1O75677 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.96■□□□□ 0.15
RFPL1O75677 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 AC112191.1-201ENST00000523689 701 ntBASIC15.96■□□□□ 0.15
RFPL1O75677 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.96■□□□□ 0.15
RFPL1O75677 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.96■□□□□ 0.15
RFPL1O75677 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.96■□□□□ 0.15
RFPL1O75677 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 AC106881.1-201ENST00000605849 3329 ntBASIC15.96■□□□□ 0.15
RFPL1O75677 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.96■□□□□ 0.15
RFPL1O75677 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RFPL1O75677 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RFPL1O75677 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFPL1O75677 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.96■□□□□ 0.14
RFPL1O75677 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.96■□□□□ 0.14
RFPL1O75677 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
RFPL1O75677 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
RFPL1O75677 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFPL1O75677 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
RFPL1O75677 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RFPL1O75677 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
RFPL1O75677 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
RFPL1O75677 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 AL035633.1-201ENST00000406139 838 ntBASIC15.95■□□□□ 0.14
RFPL1O75677 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
RFPL1O75677 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC15.95■□□□□ 0.14
RFPL1O75677 AC023141.5-201ENST00000458585 616 ntBASIC15.95■□□□□ 0.14
RFPL1O75677 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
RFPL1O75677 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.95■□□□□ 0.14
RFPL1O75677 AL096865.1-201ENST00000606796 927 ntBASIC15.95■□□□□ 0.14
RFPL1O75677 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.95■□□□□ 0.14
RFPL1O75677 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms