Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 PSMD4P1-201ENST00000433951 1109 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.2■□□□□ 0.02
GFRA3O60609 AC073150.1-201ENST00000450406 1084 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.2■□□□□ 0.02
GFRA3O60609 AC100850.1-201ENST00000506768 649 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.2■□□□□ 0.02
GFRA3O60609 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.2■□□□□ 0.02
GFRA3O60609 RPS15-205ENST00000586686 562 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 RPS15-208ENST00000591804 711 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
GFRA3O60609 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC15.2■□□□□ 0.02
GFRA3O60609 AC018470.1-201ENST00000624790 3129 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC15.2■□□□□ 0.02
GFRA3O60609 AC004899.1-201ENST00000424687 1714 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.2■□□□□ 0.02
GFRA3O60609 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GFRA3O60609 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GFRA3O60609 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
GFRA3O60609 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GFRA3O60609 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 HNRNPA1P41-201ENST00000397777 928 ntBASIC15.19■□□□□ 0.02
GFRA3O60609 KLF2P2-201ENST00000416807 1039 ntBASIC15.19■□□□□ 0.02
GFRA3O60609 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 BRI3P1-201ENST00000440440 378 ntBASIC15.19■□□□□ 0.02
GFRA3O60609 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 AP003398.1-201ENST00000531124 318 ntBASIC15.19■□□□□ 0.02
GFRA3O60609 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.19■□□□□ 0.02
GFRA3O60609 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC15.19■□□□□ 0.02
GFRA3O60609 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.19■□□□□ 0.02
GFRA3O60609 ENPP7P14-201ENST00000621765 1040 ntBASIC15.19■□□□□ 0.02
GFRA3O60609 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
GFRA3O60609 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
GFRA3O60609 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
GFRA3O60609 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
GFRA3O60609 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 RN7SKP214-201ENST00000364208 315 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 NME9-203ENST00000383180 2133 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC15.18■□□□□ 0.02
GFRA3O60609 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 TUBB8P8-201ENST00000458717 1058 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 POU5F1P6-201ENST00000466990 990 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 AC024293.1-201ENST00000467930 498 ntBASIC15.18■□□□□ 0.02
GFRA3O60609 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.18■□□□□ 0.02
GFRA3O60609 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
GFRA3O60609 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms