Protein–RNA interactions for Protein: O43602

DCX, Neuronal migration protein doublecortin, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCXO43602 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 AL513523.2-202ENST00000427283 2040 ntBASIC16.79■□□□□ 0.28
DCXO43602 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 AC006033.1-201ENST00000440505 426 ntBASIC16.79■□□□□ 0.28
DCXO43602 YBX1P6-201ENST00000442962 1002 ntBASIC16.79■□□□□ 0.28
DCXO43602 MPRIPP1-201ENST00000452433 1089 ntBASIC16.79■□□□□ 0.28
DCXO43602 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
DCXO43602 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
DCXO43602 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.79■□□□□ 0.28
DCXO43602 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
DCXO43602 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.79■□□□□ 0.28
DCXO43602 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
DCXO43602 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.78■□□□□ 0.28
DCXO43602 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 FXNP2-201ENST00000411625 547 ntBASIC16.78■□□□□ 0.28
DCXO43602 CALR4P-201ENST00000431943 946 ntBASIC16.78■□□□□ 0.28
DCXO43602 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC16.78■□□□□ 0.28
DCXO43602 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC16.78■□□□□ 0.28
DCXO43602 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC16.78■□□□□ 0.28
DCXO43602 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.78■□□□□ 0.28
DCXO43602 RARRES2P5-201ENST00000564013 466 ntBASIC16.78■□□□□ 0.28
DCXO43602 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 AC091271.1-201ENST00000611877 1162 ntBASIC16.78■□□□□ 0.28
DCXO43602 AC015967.2-201ENST00000624092 234 ntBASIC16.78■□□□□ 0.28
DCXO43602 AC006435.4-201ENST00000625037 234 ntBASIC16.78■□□□□ 0.28
DCXO43602 AL356737.1-201ENST00000634391 234 ntBASIC16.78■□□□□ 0.28
DCXO43602 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.78■□□□□ 0.28
DCXO43602 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
DCXO43602 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
DCXO43602 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.78■□□□□ 0.28
DCXO43602 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.78■□□□□ 0.28
DCXO43602 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.77■□□□□ 0.28
DCXO43602 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.77■□□□□ 0.28
DCXO43602 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 EGFEM1P-202ENST00000431685 1563 ntBASIC16.77■□□□□ 0.28
DCXO43602 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.77■□□□□ 0.28
DCXO43602 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
DCXO43602 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
DCXO43602 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.77■□□□□ 0.28
DCXO43602 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
DCXO43602 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.77■□□□□ 0.28
DCXO43602 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.77■□□□□ 0.28
DCXO43602 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms