Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ATP2A1O14983 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 ANKRD19P-201ENST00000338192 862 ntBASIC18.1■□□□□ 0.49
ATP2A1O14983 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ATP2A1O14983 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP2A1O14983 KRT18P43-201ENST00000469825 1281 ntBASIC18.1■□□□□ 0.49
ATP2A1O14983 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC18.1■□□□□ 0.49
ATP2A1O14983 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC18.1■□□□□ 0.49
ATP2A1O14983 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.1■□□□□ 0.49
ATP2A1O14983 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ATP2A1O14983 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.1■□□□□ 0.49
ATP2A1O14983 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 AL121723.1-201ENST00000445194 1519 ntBASIC18.09■□□□□ 0.49
ATP2A1O14983 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.09■□□□□ 0.49
ATP2A1O14983 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 AC005229.1-201ENST00000392885 409 ntBASIC18.09■□□□□ 0.49
ATP2A1O14983 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A1O14983 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 KRT223P-202ENST00000449164 1292 ntBASIC18.09■□□□□ 0.49
ATP2A1O14983 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A1O14983 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A1O14983 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC18.09■□□□□ 0.49
ATP2A1O14983 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 AC133552.6-201ENST00000613406 534 ntBASIC18.09■□□□□ 0.49
ATP2A1O14983 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ATP2A1O14983 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
ATP2A1O14983 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.09■□□□□ 0.49
ATP2A1O14983 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2A1O14983 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
ATP2A1O14983 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
ATP2A1O14983 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.08■□□□□ 0.49
ATP2A1O14983 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.08■□□□□ 0.49
ATP2A1O14983 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.49
ATP2A1O14983 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ATP2A1O14983 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 C1QBPP1-201ENST00000400117 770 ntBASIC18.08■□□□□ 0.48
ATP2A1O14983 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ATP2A1O14983 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ATP2A1O14983 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms