Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 KRT8P44-201ENST00000441609 1350 ntBASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.97■□□□□ 0.15
TRIM49D1C9J1S8 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AC018845.2-201ENST00000568326 409 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AL161645.1-201ENST00000622716 1255 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 REXO1L1P-202ENST00000608646 1974 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AGAP7P-201ENST00000582299 2062 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 AGAP14-201ENST00000624701 2060 ntBASIC15.96■□□□□ 0.15
TRIM49D1C9J1S8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 CICP23-201ENST00000605013 2741 ntBASIC15.96■□□□□ 0.14
TRIM49D1C9J1S8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 KRT19P2-202ENST00000557173 1012 ntBASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 AL138918.1-201ENST00000568306 659 ntBASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 AC061975.2-201ENST00000581722 295 ntBASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRIM49D1C9J1S8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms