Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 TPM4P1-201ENST00000436100 807 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC009078.2-202ENST00000463353 338 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 PDPK2P-202ENST00000562415 1191 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC145285.3-201ENST00000564603 959 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AC092865.6-201ENST00000642101 219 ntBASIC16.9■□□□□ 0.3
RCCD1A6NED2 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.9■□□□□ 0.3
RCCD1A6NED2 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RCCD1A6NED2 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RCCD1A6NED2 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.89■□□□□ 0.3
RCCD1A6NED2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RCCD1A6NED2 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.89■□□□□ 0.3
RCCD1A6NED2 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
RCCD1A6NED2 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
RCCD1A6NED2 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC093909.1-201ENST00000504731 1122 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC105233.2-201ENST00000523697 349 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 AF228730.5-201ENST00000530288 346 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC024267.1-201ENST00000582320 895 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 AL121894.2-201ENST00000602977 491 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.89■□□□□ 0.29
RCCD1A6NED2 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RCCD1A6NED2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
RCCD1A6NED2 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 RARRES2P8-201ENST00000566335 367 ntBASIC16.88■□□□□ 0.29
RCCD1A6NED2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 AL450472.2-201ENST00000603663 1156 ntBASIC16.88■□□□□ 0.29
RCCD1A6NED2 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CFTRP2-201ENST00000634304 199 ntBASIC16.88■□□□□ 0.29
RCCD1A6NED2 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RCCD1A6NED2 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.88■□□□□ 0.29
RCCD1A6NED2 CYP4F24P-201ENST00000586049 1580 ntBASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms