Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AP003680.1-201ENST00000598970 3660 ntBASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AC026979.3-201ENST00000607315 403 ntBASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
PCDHGA11Q9Y5H2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AP3S2-216ENST00000617003 1561 ntBASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 RPS8P6-201ENST00000426177 609 ntBASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AC005237.2-201ENST00000434368 219 ntBASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AL139010.1-201ENST00000454878 894 ntBASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 EHF-205ENST00000527935 557 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 AL513210.1-201ENST00000629608 234 ntBASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.46■□□□□ 0.07
PCDHGA11Q9Y5H2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.46■□□□□ 0.06
PCDHGA11Q9Y5H2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
PCDHGA11Q9Y5H2 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 AC023157.3-201ENST00000619086 2088 ntBASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 BX842568.4-201ENST00000421222 227 ntBASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 RARRES2P9-201ENST00000565168 469 ntBASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.45■□□□□ 0.06
PCDHGA11Q9Y5H2 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms